ExtremeCloud IQ- Site Engine & Extreme Management Center

i am trying to integrate 189 cisco devices into Device Manager and NAC. We have been pushing out 802.1x through wireless but now are about to start the wired network. I have successfully tested 802.1x with a test switch. We have all the cisco devices in Device Manager but with limited info available. We can see the ports and doing weekly firmware backups on all devices but are unable to monitor anything outside of ports and are not showing Vlans configured on ports. We have also tried many times to use the Firmware Upgrade with no luck. Any help you can provide would be great.

For a start.... What EMC version is installed, what Cisco model and version and post the SNMP Config of the switch.

We are running 7.1.1.9, our network is comprised of mostly Cisco 2960S and 2960X switches and a few other models. Our cores are Cisco 4507, and routers are 2900 series and 4300 series. This is my latest snmp setup that I have most recently tried. This is quite long but I have tried many different angels to snmp trying to make it work with EMC.
logging host 10.2.13.37
!
snmp-server group v3 v3 priv
snmp-server group S3curegrp v3 priv
snmp-server community S3cure RO
snmp-server location DCO Office/IT Office
snmp-server enable traps snmp authentication linkdown linkup coldstart warmstart
snmp-server enable traps transceiver all
snmp-server enable traps call-home message-send-fail server-fail
snmp-server enable traps tty
snmp-server enable traps license
snmp-server enable traps auth-framework sec-violation
snmp-server enable traps cluster
snmp-server enable traps config-copy
snmp-server enable traps config
snmp-server enable traps config-ctid
snmp-server enable traps trustsec-sxp conn-srcaddr-err msg-parse-err conn-config-err binding-err conn-up conn-down binding-expn-fail oper-nodeid-change binding-conflict
snmp-server enable traps energywise
snmp-server enable traps fru-ctrl
snmp-server enable traps entity
snmp-server enable traps event-manager
snmp-server enable traps ike policy add
snmp-server enable traps ike policy delete
snmp-server enable traps ike tunnel start
snmp-server enable traps ike tunnel stop
snmp-server enable traps ipsec cryptomap add
snmp-server enable traps ipsec cryptomap delete
snmp-server enable traps ipsec cryptomap attach
snmp-server enable traps ipsec cryptomap detach
snmp-server enable traps ipsec tunnel start
snmp-server enable traps ipsec tunnel stop
snmp-server enable traps ipsec too-many-sas
snmp-server enable traps power-ethernet group 1
snmp-server enable traps power-ethernet police
snmp-server enable traps cpu threshold
snmp-server enable traps vstack
snmp-server enable traps bridge newroot topologychange
snmp-server enable traps stpx inconsistency root-inconsistency loop-inconsistency
snmp-server enable traps syslog
snmp-server enable traps vtp
snmp-server enable traps vlancreate
snmp-server enable traps vlandelete
snmp-server enable traps flash insertion removal
snmp-server enable traps port-security
snmp-server enable traps envmon fan shutdown supply temperature status
snmp-server enable traps stackwise
snmp-server enable traps bulkstat collection transfer
snmp-server enable traps errdisable
snmp-server enable traps mac-notification change move threshold
snmp-server enable traps vlan-membership
snmp-server host 10.2.13.37 version 3 priv v3

Also wanted to point out, I am able to run the Cisco Flex view in the Java application to pull the vlans that way but it would be helpful to my team if they would show up in EMC that is much easier for them to learn to navigate.

I have a concern, you can share what configuration of snmp and syslog applied on Cisco computers both Switches, Router and Controllers and Access Point on EMC.

I would also like to know if I can register any controller in EMC and be able to have control of the APs, statistics of users registration by SSID and connections in general?

I appreciate your collaboration.