Pawel,
Depending on the platform (i.e. Exos, VSP, NetIron, Network OS) there may be other options you can use to control flow of L3 traffic from one network to another on a particular system. However, as a general rule of thumb if we are just talking theory you are really limited to using ACL's and or depending on the L3 IGP you are using possibly using Route Maps and prefix lists as well.
Regards,
Samantha Newman
Technical Support Engineer
Extreme Networks