How close together are the buildings? Seems strange that this is only happening on one of them. So unless you have configured that 'site' differently, I think you can rule out configuration problems.
What about the switch that is powering them? I had some issues at my remote sites that were using Cisco ASA5505's (very small, and the PoE is not reliable). I found that when the AP was taking a lot of connections, it would randomly drop offline, reboot, or go into a weakened state. Perhaps check the switch and see if it's lacking the power to drive these AP's. In my case, it was only a handful of AP's and using PoE power injectors fixed the problem.