It's not likely discarding. It may be more likely that internally, if switch packet processing spikes above 60 percent that a flow did not get created or mirrored. It's also possible in some instances to see on the other side, a purview appliance with high CPU (as measured via TOP) or if it is a virtual machine, the overall VM hardware is sometimes overloaded CPU's, and then problems can occur that way as well. So it VM are used it is a good idea to make adequate resources available.
However the most common explanation of your problem is the netflow data appears, but the corresponding mirrorN does not occur, at least bilaterally